Complete analysis of a dpy-22 allelic series in C. elegans

Basic statistics

Jupyter Notebook

PCA and effect size/direction of each genotype

Jupyter Notebook

Phenotypic Classes

Jupyter Notebook

Dominance analysis

Jupyter Notebook

Ontology Enrichment analysis of the dpy-22 phenotypic classes

Jupyter Notebook

Wnt and Ras Enrichment analysis of the dpy-22 phenotypic classes

Jupyter Notebook

Venn Diagram

Jupyter Notebook

False Hit Analysis

Jupyter Notebook

Quality Check, read quality

Important note: Samples from Project_18872 to Project_18878 are not C. elegans samples and were not used for this project. Please disregard those samples. MultiQC report

Contact us

If there are broken links, or you have questions, you can contact us at: dangeles@caltech.edu

or at

pws@caltech.edu